Changelog

Source: NEWS.md

jlmerclusterperm (development version)

jlmerclusterperm 1.1.3

CRAN release: 2024-03-04

No user-visible changes

Fixes for CRAN:

• Stricter specification of package versions in Project.toml to avoid version conflicts.

jlmerclusterperm 1.1.2

CRAN release: 2024-02-17

• jlmerclusterperm() exposes a cache_dir argument for manually specifying the cache directory. This was added largely for the convenience of testing. The default value of cache_dir = NULL preserves old behavior.

Fixes for CRAN:

• Write cache to tempdir() for the purposes of running examples and tests.

jlmerclusterperm 1.1.1

CRAN release: 2024-02-08

• More informative warnings when constructing a spec object

• Fixed minor bugs when interfacing with Julia

• Fixed bug with reporting convergence warnings when only one is encountered

jlmerclusterperm 1.1.0

CRAN release: 2023-10-07

Minor breaking change:

• Slightly loosened the default convergence criterion for permute_timewise_statistics()

Fixes for CRAN:

• Specified importing R_user_dir() from backports which was missing previously

jlmerclusterperm 1.0.6

CRAN release: 2023-09-19

• Fixed bug where add1 argument to walk_threshold_steps() was not being passed down properly

• R < 4.0 falls back to using backports for R_user_dir()

Fixes for CRAN:

• Downgrade DataFrames.jl dependency to 1.3 to avoid a mysterious pre-compilation failure on CRAN windows checks

jlmerclusterperm 1.0.5

CRAN release: 2023-09-10

No user-visible changes

Fixes for CRAN:

• Ensure minimum version requirements for Tables.jl and DataAPI.jl are met

jlmerclusterperm 1.0.4

CRAN release: 2023-09-06

No user-visible changes

• Restructured internal Julia code into a module (JlmerClusterPerm.jl)

• Upon activating project, Manifest.toml is cached to tools::R_user_dir() to speed up pre-compilation.

jlmerclusterperm 1.0.3

CRAN release: 2023-07-19

Fixes for CRAN:

• Use string for package version comparison

jlmerclusterperm 1.0.2

CRAN release: 2023-07-15

Bug fixes

• jlmerclusterperm_setup() now works for rc and alpha builds of Julia

Fixes for CRAN:

• The exclusion of Manifest.toml is now specified in .Rbuildignore - only Project.toml is bundled as intended.

jlmerclusterperm 1.0.1

CRAN release: 2023-07-02

jlmerclusterperm_setup() now exits early if Julia version requirement (>=1.8) is not met.

Fixes for CRAN:

• Check Julia version requirement before proceeding to examples and tests

jlmerclusterperm 1.0.0

CRAN release: 2023-06-27

Breaking changes

• The threshold_steps argument of walk_threshold_steps() is renamed to steps.

New features

• New functions to interface with Julia RNG seed: get_rng_seed() and set_rng_seed()

Other improvements

• jlmerclusterperm_setup() now echos Pkg.instantiate() to print precompilation information upon the first setup call

jlmerclusterperm 0.2.0

Added vignettes. Significant usability improvements

jlmerclusterperm 0.1.0

Initial release